--- orphan: true --- # The OpenMM Tutorials ## Basic Tutorials :::{nbgallery} --- glob: True caption: Basic Tutorials --- notebooks/tutorials/protein_in_water ::: ## Coarse-graining :::{nbgallery} --- glob: True caption: Coarse-graining --- notebooks/tutorials/coarse_grained_polymer.ipynb ::: ## Advanced Tutorials Tutorials showing more the more advanced capabilities. :::{nbgallery} --- glob: True caption: Advanced Tutorials --- notebooks/tutorials/Alchemical_free_energy_calculations.ipynb notebooks/tutorials/Beta_2_adrenergic_receptor_B2AR_membrane_protein_simulation_with_CHARMM.ipynb notebooks/tutorials/HSP90_with_ADPMg2_simulation.ipynb notebooks/tutorials/Histone_methyltransferase_simulation_with_a_multisite_water_model_TIP4P-Ew.ipynb notebooks/tutorials/Histone_methyltransferase_simulation_with_multisite_Zn2_structural_ions.ipynb notebooks/tutorials/Running_a_REST_simulation.ipynb notebooks/tutorials/umbrella_sampling.ipynb ::: ---- [Notebooks by Tag](genindex)