Basic Tutorials
Protein in Water
Coarse-graining
Coarse-Grained Polymer
Tutorials showing more the more advanced capabilities.
Advanced Tutorials
Alchemical free energy calculations
Beta-2-adrenergic receptor (B2AR) membrane protein simulation with CHARMM
HSP90 with ADP:Mg2+ simulation
Histone methyltransferase simulation with a multisite water model (TIP4P-Ew)
Histone methyltransferase simulation with multisite Zn2+ structural ions
Run a REST simulation
Umbrella Sampling
Notebooks by Tag
OpenMM Cookbook & Tutorials
